Commit Graph

87 Commits

Author SHA1 Message Date
Pau
40a0fb9bff Merge pull request #28 from vocdoni/feature/dump-writer-reader
Extend Dump methods to work with Writer&Reader
2022-08-25 16:27:37 +02:00
2380214412 Extend Dump methods to work with Writer&Reader
Add methods DumpWriter & ImportDumpReader to allow generating tree
dumps and reading them working with Reader & Writer, in order to write
and read them directly from a file (internally line by line).
2022-08-25 10:31:22 +02:00
688a2e814d Update README.md 2022-02-04 11:12:22 +01:00
a5eeb50d5e Upgrade to last goff version
Upgrade to last go-iden3-crypto, which has been upgraded to the new goff
(https://github.com/ConsenSys/goff) version used for the finite fields
arithmetic, which has been significantly optimized.

Previous:
TestAddBatchBench: nCPU: 4, nLeafs: 50000, hash: Poseidon, db: badgerdb
        Add loop:       44.043418294s
        AddBatch:       3.219378868s

New:
TestAddBatchBench: nCPU: 4, nLeafs: 50000, hash: Poseidon, db: badgerdb
        Add loop:       30.915348956s
        AddBatch:       2.289317479s

Improvement (using arbo with Poseidon hash): 1.40x
2022-01-07 11:33:41 +01:00
d56ab859f1 Use DefaultThresholdNLeafs if cfg.ThresholdNLeafs is not defined 2021-12-17 09:57:03 +01:00
arnau
96ccfdb50f Merge pull request #26 from vocdoni/feature/addbatch-bigtrees-indisk
Feature/addbatch bigtrees indisk
2021-12-17 09:42:07 +01:00
e8094038ee Complete upFromSubRoots cases & add test 2021-11-23 13:33:40 +01:00
4b6d6efdca Add thresholdNLeafs configurable
ThresholdNLeafs defines the threshold number of leafs in the tree that
determines if AddBatch will work in memory or in disk. It is defined
when calling NewTree, and if set to 0 it will work always in disk.
2021-11-23 06:59:33 +01:00
17bf867f61 Add bytes-bitmap test vectors 2021-11-12 18:59:08 +01:00
fc45fbde3f Add Pack & Unpack siblings test vectors 2021-11-11 11:40:11 +01:00
6cf1e58d9f Implement addBatchInDisk for big trees
Implement addBatchInDisk for big trees, which does not puts the tree in
memory, and works directly over the db data, parallelizing for each CPU.
2021-10-25 14:55:42 +02:00
arnau
3f7e769974 Merge pull request #24 from vocdoni/feature/addbatch-invalids-error-struct
Update AddBatch to return invalids index + error
2021-10-11 15:45:49 +02:00
7c6316dcbd Update AddBatch to return invalids index + error 2021-10-06 19:19:16 +02:00
arnau
63f7e8866e Merge pull request #21 from vocdoni/feature/keyPath-key-len-check
Update keyPath to ceil(maxLvl/8), add checks that len(key)<=maxKeyLen
2021-10-05 18:08:55 +02:00
e8404e16f3 Fix oldLeafKeyFull size at method tree.down 2021-10-05 18:06:11 +02:00
30d8b42fd3 Add checks that len(key)<=maxKeyLen
Add checks that the key is not bigger than maximum key length for the tree
maxLevels size, where maximum key len = ceil(maxLevels/8).

This is because if the key bits length is bigger than the maxLevels of the
tree, two different keys that their difference is at the end, will collision in
the same leaf of the tree (at the max depth).
2021-10-04 14:33:49 +02:00
0921cac304 Update keyPath to be ceil(maxLevels/8) 2021-10-01 10:57:50 +02:00
arnau
9eb7c8e265 Merge pull request #19 from vocdoni/feature/panic-toobig
Return err before silently discarding bytes
2021-09-30 17:31:44 +02:00
cb14f1c75b Update err msgs,update maxUint8&16, comment checks
- Update err msgs
- Update maxUint8&16
- Comment the keyPath len checks temporary to avoid external usage
errors (will be refactored in a near-future commit)
- Add missing len check on GetWithTx (commented)
2021-09-30 16:25:24 +02:00
Eduard S
a8c13ab0db Return err before silently discarding bytes 2021-09-30 16:15:51 +02:00
arnau
d7c7563413 Merge pull request #20 from vocdoni/feature/SetRoot
Add tree.SetRoot (& WithTx)
2021-09-27 15:14:31 +02:00
6062549cf0 Add tree.SetRoot (& WithTx) 2021-09-27 13:46:53 +02:00
arnau
4227039df1 Merge pull request #16 from vocdoni/feature/rlocks
Update VT goroutines errs & Update Pack&UnpackSibl
2021-09-21 17:40:09 +02:00
ed0cf70d57 Update VT goroutines errs & Update Pack&UnpackSibl
- Update VT goroutines errs to avoid race condition
- Update pack & unpack siblings to use 2-byte for full length & bitmap
bytes length
- Add check in UnpackSiblings to avoid panic
2021-09-21 17:37:11 +02:00
arnau
f09b0b0392 Merge pull request #14 from vocdoni/fix/missing-emptyHash-in-snapshottree
Add missing emptyHash in Snapshot Tree
2021-09-09 12:29:59 +02:00
64c8f8d0bc Add missing emptyHash in Snapshot Tree 2021-09-09 11:42:41 +02:00
arnau
de5914f453 Merge pull request #11 from vocdoni/fix/incNLeafs
Fix: Use GetNLeafsWithTx in incNLeafs
2021-08-31 16:15:31 +02:00
Eduard S
baa1d7af48 Fix: Use GetNLeafsWithTx in incNLeafs 2021-08-31 14:40:35 +02:00
arnau
4836f19755 Merge pull request #9 from vocdoni/fix/level
Fix level when going down & in computeHashes
2021-08-31 12:37:21 +02:00
dff11f4a7f Fix level when going down & in computeHashes
Fix level when going down & in computeHashes, this affected the methods
Get, GenProof & AddBatch.
2021-08-31 11:59:38 +02:00
arnau
61b823d444 Merge pull request #8 from vocdoni/fix/vt-addbatch
Fix/vt addbatch
2021-08-30 12:42:59 +02:00
01408fba86 Use Prefix consts instead of hardcoded values in newLeafValue & newIntermediate methods 2021-08-30 11:27:59 +02:00
1638860da0 Fix VirtualTree.addBatch bucket levels 2021-08-29 23:38:41 +02:00
bc23beb813 Add NewTreeWithTx function 2021-08-25 10:50:41 +02:00
5b1a40f7f4 Small update on errors of UpdateWithTx, GenProofWithTx, ImportDump 2021-08-24 14:51:16 +02:00
5f6c35e435 Update Snapshot & Root approach
Update Snapshot & Root approach to get the root always from the db,
except in the cases that the tree is a snapshot, in which the root will
be in memory.
In this way, when a snapshot is performed and the original tree gets
modifyed, the snapshot will still point to the old root. Also, the root
obtained from the db, uses also the db.ReadTx, so if the root is being
modifyied in the current tx (db.WriteTx), when getting the root it will
be return the lastest version that is in the tx but not yet in the db.
2021-08-13 12:38:05 +02:00
2514b3188f Update db usage to new dvote.db interface version 2021-08-06 18:41:13 +02:00
abc04a5868 Add AddBatch explanation in README.md 2021-07-28 10:05:36 +02:00
01ec075b35 Update missing errors management 2021-07-21 11:57:18 +02:00
df896f6e96 Add option to input empty values at AddBatch
Add option to input empty values at AddBatch & different number of keys
& values.
2021-07-02 19:08:46 +02:00
a8c7ea9808 Add circom test w/ circuit for CircomVerifierProof
Add circom test with circuit for CircomVerifierProofs, which allows to
automatically check that the data generated from arbo matches the circom
circuit of a SMTVerifierProof.
Added also GHA workflow to test the circuits with the output of arbo
code.
2021-06-16 09:25:04 +02:00
43cad713b0 Add Tree Circom Verifier Proofs
Circom Verifier Proofs allow to verify through a zkSNARK proof the
inclusion/exclusion of a leaf in a tree. This commit adds the needed
code in go to generate the circuit inputs for a CircomVerifierProof.
2021-06-16 08:59:02 +02:00
465f0ed172 Add Tree.Snapshot method 2021-06-14 17:51:37 +02:00
f10265ed40 Migrate repository to github.com/vocdoni/arbo 2021-06-08 11:27:04 +02:00
f2d5037862 Add Usage section to README.md 2021-06-04 19:03:25 +02:00
2c62f31446 Update upFromNodes function for unbalanced tree
- Update upFromNodes function for unbalanced tree case
- Add AddBatchTestVector2 & 3 with some edge cases
- Add checkRoots test method, which stores the Dump of the tree to file for after-debug
2021-06-03 18:27:46 +02:00
c6059fcb75 Migrate kv db to go.vocdoni.io/dvote/db interface
Case tree empty, AddBatch was 10.95x times faster than without AddBatch
	nCPU: 4, nLeafs: 1024, hash: Poseidon, db: memory
	dbgStats(hash: 2.047k, dbGet: 1, dbPut: 2.049k)
Case tree not empty w/ few leafs, AddBatch was 7.28x times faster than without AddBatch
	nCPU: 4, nLeafs: 1024, hash: Poseidon, db: memory
	dbgStats(hash: 2.047k, dbGet: 198, dbPut: 2.049k)
Case tree not empty w/ enough leafs, AddBatch was 5.94x times faster than without AddBatch
	nCPU: 4, nLeafs: 1024, hash: Poseidon, db: memory
	dbgStats(hash: 2.047k, dbGet: 1.000k, dbPut: 2.049k)
Case tree not empty, AddBatch was 9.27x times faster than without AddBatch
	nCPU: 4, nLeafs: 4096, hash: Poseidon, db: memory
	dbgStats(hash: 8.191k, dbGet: 1.800k, dbPut: 8.193k)
Case tree not empty & unbalanced, AddBatch was 10.67x times faster than without AddBatch
	nCPU: 4, nLeafs: 4096, hash: Poseidon, db: memory
	dbgStats(hash: 10.409k, dbGet: 2.668k, dbPut: 10.861k)
TestAddBatchBench: nCPU: 4, nLeafs: 50000, hash: Blake2b, db: badgerdb
	Add loop:	10.10829114s
	AddBatch:	732.030263ms
		dbgStats(hash: 122.518k, dbGet: 1, dbPut: 122.520k)
TestDbgStats
	add in loop in emptyTree dbgStats(hash: 141.721k, dbGet: 134.596k, dbPut: 161.721k)
	addbatch caseEmptyTree dbgStats(hash: 24.402k, dbGet: 1, dbPut: 24.404k)
	addbatch caseNotEmptyTree dbgStats(hash: 26.868k, dbGet: 2.468k, dbPut: 26.872k)
2021-06-03 18:23:45 +02:00
467f063129 Update check of already existing key on add
- Update check of already existing key on add
- Update docs of methods
2021-06-02 10:26:40 +02:00
0b2c3b07ed Update public methods signatures
- Update public methods signatures
- Remove 'lastAccess' param
- Add option to pass root for tree.Dump, Iterate, IterateWithStop,
Graphviz (and related)
- Move error messages to const defined error messages for external usage
2021-05-26 17:01:09 +02:00
f24fb28266 Small update addbatch_test.go org 2021-05-26 09:30:57 +02:00